Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AL031595.1-201ENST00000623969 4709 ntBASIC11.47□□□□□ -0.57
PCP4P48539 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
PCP4P48539 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PCP4P48539 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
PCP4P48539 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 ZNF815P-204ENST00000434898 1737 ntBASIC11.46□□□□□ -0.57
PCP4P48539 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
PCP4P48539 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PCP4P48539 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC11.46□□□□□ -0.57
PCP4P48539 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
PCP4P48539 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
PCP4P48539 AC134407.2-201ENST00000625089 1978 ntBASIC11.46□□□□□ -0.58
PCP4P48539 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
PCP4P48539 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.46□□□□□ -0.58
PCP4P48539 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
PCP4P48539 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.46□□□□□ -0.58
PCP4P48539 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 AL359881.3-201ENST00000602640 1721 ntBASIC11.46□□□□□ -0.58
PCP4P48539 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
PCP4P48539 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
PCP4P48539 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.46□□□□□ -0.58
PCP4P48539 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
PCP4P48539 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 AC009237.14-201ENST00000609975 1594 ntBASIC11.45□□□□□ -0.58
PCP4P48539 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
PCP4P48539 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
PCP4P48539 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
PCP4P48539 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms