Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.93■□□□□ 0.46
BRCC3P46736 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.93■□□□□ 0.46
BRCC3P46736 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.93■□□□□ 0.46
BRCC3P46736 WASH6P-202ENST00000359512 1437 ntBASIC17.93■□□□□ 0.46
BRCC3P46736 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.93■□□□□ 0.46
BRCC3P46736 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.93■□□□□ 0.46
BRCC3P46736 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.93■□□□□ 0.46
BRCC3P46736 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
BRCC3P46736 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
BRCC3P46736 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
BRCC3P46736 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.93■□□□□ 0.46
BRCC3P46736 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.93■□□□□ 0.46
BRCC3P46736 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.93■□□□□ 0.46
BRCC3P46736 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.93■□□□□ 0.46
BRCC3P46736 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.93■□□□□ 0.46
BRCC3P46736 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BRCC3P46736 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
BRCC3P46736 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BRCC3P46736 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.93■□□□□ 0.46
BRCC3P46736 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.93■□□□□ 0.46
BRCC3P46736 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.93■□□□□ 0.46
BRCC3P46736 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.93■□□□□ 0.46
BRCC3P46736 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
BRCC3P46736 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.92■□□□□ 0.46
BRCC3P46736 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BRCC3P46736 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.92■□□□□ 0.46
BRCC3P46736 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 KRT18P32-201ENST00000424695 1287 ntBASIC17.92■□□□□ 0.46
BRCC3P46736 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 LINC01225-203ENST00000563550 1244 ntBASIC17.92■□□□□ 0.46
BRCC3P46736 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.92■□□□□ 0.46
BRCC3P46736 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.92■□□□□ 0.46
BRCC3P46736 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.92■□□□□ 0.46
BRCC3P46736 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 AC016027.1-202ENST00000607927 1699 ntBASIC17.92■□□□□ 0.46
BRCC3P46736 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.92■□□□□ 0.46
BRCC3P46736 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRCC3P46736 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
BRCC3P46736 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BRCC3P46736 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.91■□□□□ 0.46
BRCC3P46736 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
BRCC3P46736 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
BRCC3P46736 AL023806.1-201ENST00000603994 1649 ntBASIC17.91■□□□□ 0.46
BRCC3P46736 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.91■□□□□ 0.46
BRCC3P46736 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
BRCC3P46736 PMS2P4-201ENST00000412466 1052 ntBASIC17.91■□□□□ 0.46
BRCC3P46736 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.91■□□□□ 0.46
BRCC3P46736 IGHV3-62-201ENST00000520057 340 ntBASIC17.91■□□□□ 0.46
BRCC3P46736 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRCC3P46736 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.91■□□□□ 0.46
BRCC3P46736 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BRCC3P46736 AC025678.2-201ENST00000562061 970 ntBASIC17.91■□□□□ 0.46
BRCC3P46736 AC093512.1-201ENST00000617969 520 ntBASIC17.91■□□□□ 0.46
BRCC3P46736 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.91■□□□□ 0.46
BRCC3P46736 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.91■□□□□ 0.46
BRCC3P46736 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms