Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CXCL5P42830 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CXCL5P42830 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.48□□□□□ -0.57
CXCL5P42830 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CXCL5P42830 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CXCL5P42830 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.47□□□□□ -0.57
CXCL5P42830 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CXCL5P42830 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 AC007950.2-201ENST00000615045 2347 ntBASIC11.47□□□□□ -0.57
CXCL5P42830 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 AC092053.1-201ENST00000605787 1936 ntBASIC11.47□□□□□ -0.57
CXCL5P42830 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 AC010460.3-201ENST00000511359 1579 ntBASIC11.47□□□□□ -0.57
CXCL5P42830 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 MIR662-201ENST00000384847 95 ntBASIC11.47□□□□□ -0.57
CXCL5P42830 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC11.47□□□□□ -0.57
CXCL5P42830 AL359075.1-203ENST00000462729 1002 ntBASIC11.47□□□□□ -0.57
CXCL5P42830 DENND3-207ENST00000518347 850 ntTSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.47□□□□□ -0.57
CXCL5P42830 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.47□□□□□ -0.57
CXCL5P42830 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.47□□□□□ -0.57
CXCL5P42830 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
CXCL5P42830 AC019129.2-201ENST00000609837 1235 ntBASIC11.47□□□□□ -0.57
CXCL5P42830 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CXCL5P42830 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC11.47□□□□□ -0.57
CXCL5P42830 AC078925.2-201ENST00000624013 1973 ntBASIC11.47□□□□□ -0.57
CXCL5P42830 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CXCL5P42830 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.46□□□□□ -0.57
CXCL5P42830 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CXCL5P42830 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 GPR89P-201ENST00000407924 1495 ntBASIC11.46□□□□□ -0.57
CXCL5P42830 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CXCL5P42830 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CXCL5P42830 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
CXCL5P42830 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.46□□□□□ -0.57
CXCL5P42830 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.46□□□□□ -0.57
CXCL5P42830 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
CXCL5P42830 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CXCL5P42830 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.46□□□□□ -0.57
CXCL5P42830 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CXCL5P42830 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.46□□□□□ -0.58
CXCL5P42830 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
CXCL5P42830 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
CXCL5P42830 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CXCL5P42830 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
CXCL5P42830 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CXCL5P42830 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms