Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V1AP38606 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.37■■□□□ 1.01
ATP6V1AP38606 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.37■■□□□ 1.01
ATP6V1AP38606 AC004840.1-201ENST00000636359 365 ntBASIC21.37■■□□□ 1.01
ATP6V1AP38606 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
ATP6V1AP38606 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.37■■□□□ 1.01
ATP6V1AP38606 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V1AP38606 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V1AP38606 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V1AP38606 AC016396.2-201ENST00000562575 1417 ntBASIC21.37■■□□□ 1.01
ATP6V1AP38606 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V1AP38606 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V1AP38606 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP6V1AP38606 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP6V1AP38606 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 LETM1P2-201ENST00000597330 2178 ntBASIC21.36■■□□□ 1.01
ATP6V1AP38606 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 AL353779.1-201ENST00000434793 351 ntBASIC21.36■■□□□ 1.01
ATP6V1AP38606 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 AC138969.3-201ENST00000546612 1459 ntBASIC21.36■■□□□ 1.01
ATP6V1AP38606 AC138932.2-201ENST00000548268 1459 ntBASIC21.36■■□□□ 1.01
ATP6V1AP38606 AC126755.4-201ENST00000549796 1459 ntBASIC21.36■■□□□ 1.01
ATP6V1AP38606 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
ATP6V1AP38606 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP6V1AP38606 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP6V1AP38606 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ATP6V1AP38606 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 SPTSSB-204ENST00000617024 1292 ntBASIC21.35■■□□□ 1.01
ATP6V1AP38606 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.35■■□□□ 1.01
ATP6V1AP38606 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP6V1AP38606 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ATP6V1AP38606 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 FAM220BP-201ENST00000377689 816 ntBASIC21.34■■□□□ 1.01
ATP6V1AP38606 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 AC140912.1-201ENST00000577171 1054 ntBASIC21.34■■□□□ 1.01
ATP6V1AP38606 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.34■■□□□ 1.01
ATP6V1AP38606 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.34■■□□□ 1.01
ATP6V1AP38606 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.34■■□□□ 1.01
ATP6V1AP38606 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.34■■□□□ 1.01
ATP6V1AP38606 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP6V1AP38606 AL354751.1-201ENST00000412768 1863 ntBASIC21.34■■□□□ 1.01
ATP6V1AP38606 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP6V1AP38606 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms