Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 AC131009.4-201ENST00000624048 1740 ntBASIC19.28■□□□□ 0.68
COPB2P35606 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COPB2P35606 AL138688.1-201ENST00000624851 1594 ntBASIC19.27■□□□□ 0.68
COPB2P35606 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COPB2P35606 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COPB2P35606 KRT8P49-201ENST00000604166 1432 ntBASIC19.27■□□□□ 0.68
COPB2P35606 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
COPB2P35606 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COPB2P35606 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COPB2P35606 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COPB2P35606 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.27■□□□□ 0.68
COPB2P35606 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COPB2P35606 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COPB2P35606 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COPB2P35606 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
COPB2P35606 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.27■□□□□ 0.68
COPB2P35606 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.27■□□□□ 0.68
COPB2P35606 SPDYE14P-201ENST00000442619 822 ntBASIC19.27■□□□□ 0.68
COPB2P35606 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
COPB2P35606 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.27■□□□□ 0.68
COPB2P35606 AC021097.1-201ENST00000607902 574 ntBASIC19.27■□□□□ 0.68
COPB2P35606 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.27■□□□□ 0.68
COPB2P35606 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
COPB2P35606 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COPB2P35606 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.27■□□□□ 0.68
COPB2P35606 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COPB2P35606 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COPB2P35606 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.27■□□□□ 0.67
COPB2P35606 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COPB2P35606 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.26■□□□□ 0.67
COPB2P35606 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 MIR943-201ENST00000401286 94 ntBASIC19.26■□□□□ 0.67
COPB2P35606 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.26■□□□□ 0.67
COPB2P35606 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.26■□□□□ 0.67
COPB2P35606 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 INGX-202ENST00000489074 768 ntBASIC19.26■□□□□ 0.67
COPB2P35606 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.26■□□□□ 0.67
COPB2P35606 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.26■□□□□ 0.67
COPB2P35606 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.26■□□□□ 0.67
COPB2P35606 AP000842.3-202ENST00000569238 1080 ntBASIC19.26■□□□□ 0.67
COPB2P35606 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COPB2P35606 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.26■□□□□ 0.67
COPB2P35606 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.26■□□□□ 0.67
COPB2P35606 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.26■□□□□ 0.67
COPB2P35606 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.26■□□□□ 0.67
COPB2P35606 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.26■□□□□ 0.67
COPB2P35606 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPB2P35606 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
COPB2P35606 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COPB2P35606 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COPB2P35606 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.25■□□□□ 0.67
COPB2P35606 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 MIR346-201ENST00000362234 95 ntBASIC19.25■□□□□ 0.67
COPB2P35606 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.25■□□□□ 0.67
COPB2P35606 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 SLC25A1P3-201ENST00000395415 828 ntBASIC19.25■□□□□ 0.67
COPB2P35606 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.25■□□□□ 0.67
COPB2P35606 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.25■□□□□ 0.67
COPB2P35606 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COPB2P35606 COX20P2-201ENST00000452636 358 ntBASIC19.25■□□□□ 0.67
COPB2P35606 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.25■□□□□ 0.67
COPB2P35606 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.25■□□□□ 0.67
COPB2P35606 SLC25A39P2-201ENST00000537614 270 ntBASIC19.25■□□□□ 0.67
COPB2P35606 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.25■□□□□ 0.67
COPB2P35606 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 AC027307.2-201ENST00000591252 911 ntBASIC19.25■□□□□ 0.67
COPB2P35606 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.25■□□□□ 0.67
COPB2P35606 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.25■□□□□ 0.67
COPB2P35606 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COPB2P35606 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.25■□□□□ 0.67
COPB2P35606 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPB2P35606 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.25■□□□□ 0.67
COPB2P35606 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms