Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 AC007663.1-201ENST00000438948 1240 ntBASIC14.34□□□□□ -0.11
VAMP1P23763 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.34□□□□□ -0.11
VAMP1P23763 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VAMP1P23763 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 AL157888.1-201ENST00000631930 593 ntBASIC14.34□□□□□ -0.11
VAMP1P23763 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
VAMP1P23763 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VAMP1P23763 AL391256.1-201ENST00000443260 1855 ntBASIC14.33□□□□□ -0.11
VAMP1P23763 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
VAMP1P23763 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
VAMP1P23763 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
VAMP1P23763 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.33□□□□□ -0.11
VAMP1P23763 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VAMP1P23763 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VAMP1P23763 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.33□□□□□ -0.11
VAMP1P23763 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VAMP1P23763 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VAMP1P23763 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.33□□□□□ -0.12
VAMP1P23763 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.33□□□□□ -0.12
VAMP1P23763 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 TSPY12P-201ENST00000421279 868 ntBASIC14.33□□□□□ -0.12
VAMP1P23763 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.33□□□□□ -0.12
VAMP1P23763 AC009947.2-201ENST00000444014 672 ntBASIC14.33□□□□□ -0.12
VAMP1P23763 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.33□□□□□ -0.12
VAMP1P23763 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.33□□□□□ -0.12
VAMP1P23763 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 AC024563.2-201ENST00000603282 481 ntBASIC14.33□□□□□ -0.12
VAMP1P23763 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
VAMP1P23763 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.33□□□□□ -0.12
VAMP1P23763 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 EGFEM1P-202ENST00000431685 1563 ntBASIC14.33□□□□□ -0.12
VAMP1P23763 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VAMP1P23763 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VAMP1P23763 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VAMP1P23763 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.32□□□□□ -0.12
VAMP1P23763 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.32□□□□□ -0.12
VAMP1P23763 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.32□□□□□ -0.12
VAMP1P23763 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.32□□□□□ -0.12
VAMP1P23763 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VAMP1P23763 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 MYCLP1-201ENST00000372451 1075 ntBASIC14.32□□□□□ -0.12
VAMP1P23763 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms