Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.32■■□□□ 1
ITGB4P16144 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.32■■□□□ 1
ITGB4P16144 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
ITGB4P16144 AC098850.1-201ENST00000419919 790 ntBASIC21.32■■□□□ 1
ITGB4P16144 AC114501.2-201ENST00000439631 535 ntBASIC21.32■■□□□ 1
ITGB4P16144 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 AC093004.1-201ENST00000508850 424 ntBASIC21.32■■□□□ 1
ITGB4P16144 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.32■■□□□ 1
ITGB4P16144 AC023310.3-201ENST00000557027 670 ntBASIC21.32■■□□□ 1
ITGB4P16144 AC100756.1-201ENST00000562736 682 ntBASIC21.32■■□□□ 1
ITGB4P16144 AC138749.3-201ENST00000567691 622 ntBASIC21.32■■□□□ 1
ITGB4P16144 AC116165.1-201ENST00000611806 668 ntBASIC21.32■■□□□ 1
ITGB4P16144 AC134043.2-201ENST00000624206 2238 ntBASIC21.32■■□□□ 1
ITGB4P16144 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.32■■□□□ 1
ITGB4P16144 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.32■■□□□ 1
ITGB4P16144 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.32■■□□□ 1
ITGB4P16144 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ITGB4P16144 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.32■■□□□ 1
ITGB4P16144 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ITGB4P16144 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.32■■□□□ 1
ITGB4P16144 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.32■■□□□ 1
ITGB4P16144 KRT8P39-201ENST00000396270 1433 ntBASIC21.32■■□□□ 1
ITGB4P16144 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ITGB4P16144 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ITGB4P16144 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.32■■□□□ 1
ITGB4P16144 AC024267.1-201ENST00000582320 895 ntBASIC21.32■■□□□ 1
ITGB4P16144 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.31■■□□□ 1
ITGB4P16144 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.31■■□□□ 1
ITGB4P16144 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC21.31■■□□□ 1
ITGB4P16144 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ITGB4P16144 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.31■■□□□ 1
ITGB4P16144 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.31■■□□□ 1
ITGB4P16144 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC21.31■■□□□ 1
ITGB4P16144 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ITGB4P16144 LINC02012-201ENST00000608206 1725 ntBASIC21.31■■□□□ 1
ITGB4P16144 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ITGB4P16144 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.31■■□□□ 1
ITGB4P16144 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ITGB4P16144 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.31■■□□□ 1
ITGB4P16144 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ITGB4P16144 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ITGB4P16144 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.31■■□□□ 1
ITGB4P16144 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.31■■□□□ 1
ITGB4P16144 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.31■■□□□ 1
ITGB4P16144 AC022494.1-201ENST00000466044 728 ntBASIC21.31■■□□□ 1
ITGB4P16144 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.31■■□□□ 1
ITGB4P16144 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.31■■□□□ 1
ITGB4P16144 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.31■■□□□ 1
ITGB4P16144 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.31■■□□□ 1
ITGB4P16144 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.31■■□□□ 1
ITGB4P16144 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ITGB4P16144 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ITGB4P16144 NOC2LP1-202ENST00000452600 2235 ntBASIC21.31■■□□□ 1
ITGB4P16144 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ITGB4P16144 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.3■■□□□ 1
ITGB4P16144 CROCCP2-202ENST00000412962 2773 ntBASIC21.3■■□□□ 1
ITGB4P16144 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 AL023806.1-201ENST00000603994 1649 ntBASIC21.3■■□□□ 1
ITGB4P16144 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.3■■□□□ 1
ITGB4P16144 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.3■■□□□ 1
ITGB4P16144 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.3■■□□□ 1
ITGB4P16144 TTTY23B-201ENST00000442790 549 ntBASIC21.3■■□□□ 1
ITGB4P16144 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.3■■□□□ 1
ITGB4P16144 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.3■■□□□ 1
ITGB4P16144 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.3■■□□□ 1
ITGB4P16144 AC006277.1-201ENST00000624348 1610 ntBASIC21.3■■□□□ 1
ITGB4P16144 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC21.3■■□□□ 1
ITGB4P16144 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ITGB4P16144 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.29■■□□□ 1
ITGB4P16144 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.29■■□□□ 1
ITGB4P16144 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.29■■□□□ 1
ITGB4P16144 AL589987.1-201ENST00000453380 819 ntBASIC21.29■■□□□ 1
ITGB4P16144 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.29■■□□□ 1
ITGB4P16144 AC098859.1-201ENST00000502915 1238 ntBASIC21.29■■□□□ 1
ITGB4P16144 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC21.29■■□□□ 1
ITGB4P16144 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.29■■□□□ 1
ITGB4P16144 AC008735.3-201ENST00000596646 500 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms