Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.3■□□□□ 0.84
APPP05067 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPP05067 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPP05067 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.3■□□□□ 0.84
APPP05067 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPP05067 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPP05067 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
APPP05067 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
APPP05067 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.29■□□□□ 0.84
APPP05067 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.29■□□□□ 0.84
APPP05067 AL513480.1-201ENST00000451731 511 ntBASIC20.29■□□□□ 0.84
APPP05067 PGAM5P1-201ENST00000518923 814 ntBASIC20.29■□□□□ 0.84
APPP05067 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.29■□□□□ 0.84
APPP05067 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.29■□□□□ 0.84
APPP05067 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.29■□□□□ 0.84
APPP05067 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.29■□□□□ 0.84
APPP05067 AC096734.2-201ENST00000562054 433 ntBASIC20.29■□□□□ 0.84
APPP05067 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.29■□□□□ 0.84
APPP05067 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.29■□□□□ 0.84
APPP05067 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.29■□□□□ 0.84
APPP05067 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.29■□□□□ 0.84
APPP05067 AL021920.2-201ENST00000624828 1351 ntBASIC20.29■□□□□ 0.84
APPP05067 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
APPP05067 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.29■□□□□ 0.84
APPP05067 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.29■□□□□ 0.84
APPP05067 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPP05067 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
APPP05067 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
APPP05067 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPP05067 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPP05067 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
APPP05067 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.28■□□□□ 0.84
APPP05067 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.28■□□□□ 0.84
APPP05067 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPP05067 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
APPP05067 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
APPP05067 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.28■□□□□ 0.84
APPP05067 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.28■□□□□ 0.84
APPP05067 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.28■□□□□ 0.84
APPP05067 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.28■□□□□ 0.84
APPP05067 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.28■□□□□ 0.84
APPP05067 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.28■□□□□ 0.84
APPP05067 AC107918.2-201ENST00000530817 355 ntBASIC20.28■□□□□ 0.84
APPP05067 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
APPP05067 AC124947.2-201ENST00000547118 1133 ntBASIC20.28■□□□□ 0.84
APPP05067 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
APPP05067 AC040169.1-201ENST00000565382 521 ntBASIC20.28■□□□□ 0.84
APPP05067 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.28■□□□□ 0.84
APPP05067 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.28■□□□□ 0.84
APPP05067 REXO1L3P-201ENST00000622202 1288 ntBASIC20.28■□□□□ 0.84
APPP05067 AC004877.2-201ENST00000623941 599 ntBASIC20.28■□□□□ 0.84
APPP05067 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.28■□□□□ 0.84
APPP05067 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.28■□□□□ 0.84
APPP05067 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPP05067 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPP05067 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
APPP05067 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPP05067 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPP05067 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.28■□□□□ 0.84
APPP05067 BCAR1-209ENST00000546196 1340 ntBASIC20.27■□□□□ 0.84
APPP05067 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.27■□□□□ 0.84
APPP05067 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
APPP05067 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
APPP05067 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
APPP05067 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APPP05067 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
APPP05067 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
APPP05067 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APPP05067 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.27■□□□□ 0.84
APPP05067 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.27■□□□□ 0.84
APPP05067 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
APPP05067 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.27■□□□□ 0.84
APPP05067 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
APPP05067 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
APPP05067 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.27■□□□□ 0.84
APPP05067 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.27■□□□□ 0.84
APPP05067 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.27■□□□□ 0.84
APPP05067 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.27■□□□□ 0.84
APPP05067 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.27■□□□□ 0.84
APPP05067 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
APPP05067 ACTL9-202ENST00000612068 1252 ntBASIC20.27■□□□□ 0.84
APPP05067 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.27■□□□□ 0.84
APPP05067 AC092865.6-201ENST00000642101 219 ntBASIC20.27■□□□□ 0.84
APPP05067 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
APPP05067 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
APPP05067 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
APPP05067 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
APPP05067 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
APPP05067 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.27■□□□□ 0.84
APPP05067 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
APPP05067 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
APPP05067 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms