Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
APOEP02649 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOEP02649 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOEP02649 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
APOEP02649 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOEP02649 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
APOEP02649 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
APOEP02649 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOEP02649 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
APOEP02649 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
APOEP02649 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.74■□□□□ 0.43
APOEP02649 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
APOEP02649 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
APOEP02649 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 CRYGEP-201ENST00000412192 528 ntBASIC17.74■□□□□ 0.43
APOEP02649 PMS2P1-201ENST00000431037 1228 ntBASIC17.74■□□□□ 0.43
APOEP02649 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.74■□□□□ 0.43
APOEP02649 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 KRT18P58-201ENST00000527480 1120 ntBASIC17.74■□□□□ 0.43
APOEP02649 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.74■□□□□ 0.43
APOEP02649 AC027601.4-201ENST00000611259 610 ntBASIC17.74■□□□□ 0.43
APOEP02649 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.74■□□□□ 0.43
APOEP02649 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.74■□□□□ 0.43
APOEP02649 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.74■□□□□ 0.43
APOEP02649 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.74■□□□□ 0.43
APOEP02649 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APOEP02649 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
APOEP02649 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
APOEP02649 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
APOEP02649 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
APOEP02649 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.73■□□□□ 0.43
APOEP02649 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.73■□□□□ 0.43
APOEP02649 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
APOEP02649 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 LINC02012-201ENST00000608206 1725 ntBASIC17.73■□□□□ 0.43
APOEP02649 AC060834.1-201ENST00000443027 2032 ntBASIC17.73■□□□□ 0.43
APOEP02649 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.73■□□□□ 0.43
APOEP02649 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.73■□□□□ 0.43
APOEP02649 MED15P5-201ENST00000423150 992 ntBASIC17.73■□□□□ 0.43
APOEP02649 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.73■□□□□ 0.43
APOEP02649 AL591424.1-201ENST00000442569 1213 ntBASIC17.73■□□□□ 0.43
APOEP02649 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.73■□□□□ 0.43
APOEP02649 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
APOEP02649 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.73■□□□□ 0.43
APOEP02649 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.73■□□□□ 0.43
APOEP02649 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.73■□□□□ 0.43
APOEP02649 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.73■□□□□ 0.43
APOEP02649 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
APOEP02649 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
APOEP02649 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
APOEP02649 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APOEP02649 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
APOEP02649 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
APOEP02649 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
APOEP02649 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 AC011270.2-201ENST00000624293 2550 ntBASIC17.72■□□□□ 0.43
APOEP02649 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.72■□□□□ 0.43
APOEP02649 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.72■□□□□ 0.43
APOEP02649 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.72■□□□□ 0.43
APOEP02649 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.72■□□□□ 0.43
APOEP02649 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
APOEP02649 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
APOEP02649 VN2R19P-201ENST00000442399 1052 ntBASIC17.72■□□□□ 0.43
APOEP02649 AC087163.2-201ENST00000457299 853 ntBASIC17.72■□□□□ 0.43
APOEP02649 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.72■□□□□ 0.43
APOEP02649 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.72■□□□□ 0.43
APOEP02649 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
APOEP02649 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.72■□□□□ 0.43
APOEP02649 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 AC106886.4-201ENST00000623557 2502 ntBASIC17.72■□□□□ 0.43
APOEP02649 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.72■□□□□ 0.43
APOEP02649 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APOEP02649 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms