Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COL1A1P02452 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
COL1A1P02452 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL1A1P02452 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.18■□□□□ 0.82
COL1A1P02452 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.18■□□□□ 0.82
COL1A1P02452 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.18■□□□□ 0.82
COL1A1P02452 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL1A1P02452 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
COL1A1P02452 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.17■□□□□ 0.82
COL1A1P02452 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.17■□□□□ 0.82
COL1A1P02452 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.17■□□□□ 0.82
COL1A1P02452 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
COL1A1P02452 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.17■□□□□ 0.82
COL1A1P02452 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.17■□□□□ 0.82
COL1A1P02452 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.17■□□□□ 0.82
COL1A1P02452 IGHV3-42-201ENST00000520410 361 ntBASIC20.17■□□□□ 0.82
COL1A1P02452 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.17■□□□□ 0.82
COL1A1P02452 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL1A1P02452 AL645728.1-201ENST00000366221 2101 ntBASIC20.16■□□□□ 0.82
COL1A1P02452 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
COL1A1P02452 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COL1A1P02452 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COL1A1P02452 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COL1A1P02452 AC105233.2-201ENST00000523697 349 ntBASIC20.16■□□□□ 0.82
COL1A1P02452 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.16■□□□□ 0.82
COL1A1P02452 AF228730.5-201ENST00000530288 346 ntBASIC20.16■□□□□ 0.82
COL1A1P02452 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.16■□□□□ 0.82
COL1A1P02452 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.16■□□□□ 0.82
COL1A1P02452 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
COL1A1P02452 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL1A1P02452 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.16■□□□□ 0.82
COL1A1P02452 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.15■□□□□ 0.82
COL1A1P02452 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
COL1A1P02452 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.15■□□□□ 0.82
COL1A1P02452 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.15■□□□□ 0.82
COL1A1P02452 CRB3P1-201ENST00000449338 276 ntBASIC20.15■□□□□ 0.82
COL1A1P02452 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.15■□□□□ 0.82
COL1A1P02452 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.15■□□□□ 0.82
COL1A1P02452 LINC02560-201ENST00000596379 459 ntBASIC20.15■□□□□ 0.82
COL1A1P02452 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL1A1P02452 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
COL1A1P02452 AC005332.8-201ENST00000622750 2735 ntBASIC20.15■□□□□ 0.82
COL1A1P02452 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.14■□□□□ 0.82
COL1A1P02452 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A1P02452 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A1P02452 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A1P02452 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.14■□□□□ 0.82
COL1A1P02452 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
COL1A1P02452 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL1A1P02452 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A1P02452 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.14■□□□□ 0.81
COL1A1P02452 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A1P02452 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.14■□□□□ 0.81
COL1A1P02452 AC092580.3-201ENST00000430932 139 ntBASIC20.14■□□□□ 0.81
COL1A1P02452 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A1P02452 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A1P02452 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.14■□□□□ 0.81
COL1A1P02452 PRYP6-201ENST00000514804 343 ntBASIC20.14■□□□□ 0.81
COL1A1P02452 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.14■□□□□ 0.81
COL1A1P02452 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A1P02452 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL1A1P02452 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
COL1A1P02452 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms