Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.07■□□□□ 0.48
TIMP1P01033 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.07■□□□□ 0.48
TIMP1P01033 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.07■□□□□ 0.48
TIMP1P01033 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.07■□□□□ 0.48
TIMP1P01033 SRD5A3P1-201ENST00000603021 949 ntBASIC18.07■□□□□ 0.48
TIMP1P01033 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.07■□□□□ 0.48
TIMP1P01033 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.07■□□□□ 0.48
TIMP1P01033 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.07■□□□□ 0.48
TIMP1P01033 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TIMP1P01033 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TIMP1P01033 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 SLC25A1P3-201ENST00000395415 828 ntBASIC18.06■□□□□ 0.48
TIMP1P01033 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TIMP1P01033 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TIMP1P01033 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 AC119751.2-201ENST00000504529 210 ntBASIC18.06■□□□□ 0.48
TIMP1P01033 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TIMP1P01033 AP005482.1-201ENST00000563722 1273 ntBASIC18.06■□□□□ 0.48
TIMP1P01033 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.06■□□□□ 0.48
TIMP1P01033 AC084346.2-201ENST00000607097 949 ntBASIC18.06■□□□□ 0.48
TIMP1P01033 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 COX11-210ENST00000639671 696 ntBASIC18.06■□□□□ 0.48
TIMP1P01033 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.06■□□□□ 0.48
TIMP1P01033 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 AC012317.2-201ENST00000623305 2251 ntBASIC18.06■□□□□ 0.48
TIMP1P01033 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.06■□□□□ 0.48
TIMP1P01033 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.06■□□□□ 0.48
TIMP1P01033 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TIMP1P01033 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.05■□□□□ 0.48
TIMP1P01033 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.05■□□□□ 0.48
TIMP1P01033 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.05■□□□□ 0.48
TIMP1P01033 SERBP1P3-201ENST00000459980 809 ntBASIC18.05■□□□□ 0.48
TIMP1P01033 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 TPRX2P-201ENST00000535362 881 ntBASIC18.05■□□□□ 0.48
TIMP1P01033 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.05■□□□□ 0.48
TIMP1P01033 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.05■□□□□ 0.48
TIMP1P01033 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.05■□□□□ 0.48
TIMP1P01033 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.05■□□□□ 0.48
TIMP1P01033 CTBP2P3-201ENST00000585629 1255 ntBASIC18.05■□□□□ 0.48
TIMP1P01033 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.05■□□□□ 0.48
TIMP1P01033 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.05■□□□□ 0.48
TIMP1P01033 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.05■□□□□ 0.48
TIMP1P01033 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TIMP1P01033 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 AC016396.2-201ENST00000562575 1417 ntBASIC18.05■□□□□ 0.48
TIMP1P01033 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
TIMP1P01033 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.05■□□□□ 0.48
TIMP1P01033 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.05■□□□□ 0.48
TIMP1P01033 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TIMP1P01033 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TIMP1P01033 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TIMP1P01033 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TIMP1P01033 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TIMP1P01033 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.04■□□□□ 0.48
TIMP1P01033 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms