Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPTM1O96005 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CLPTM1O96005 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.05■□□□□ 0.16
CLPTM1O96005 AC006058.4-201ENST00000624016 1670 ntBASIC16.05■□□□□ 0.16
CLPTM1O96005 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.04■□□□□ 0.16
CLPTM1O96005 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
CLPTM1O96005 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CLPTM1O96005 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CLPTM1O96005 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLPTM1O96005 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.04■□□□□ 0.16
CLPTM1O96005 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 AC117947.1-201ENST00000427448 529 ntBASIC16.04■□□□□ 0.16
CLPTM1O96005 COX11P1-201ENST00000489116 835 ntBASIC16.04■□□□□ 0.16
CLPTM1O96005 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.04■□□□□ 0.16
CLPTM1O96005 WWOX-216ENST00000569818 525 ntBASIC16.04■□□□□ 0.16
CLPTM1O96005 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 AL023973.1-201ENST00000624619 620 ntBASIC16.04■□□□□ 0.16
CLPTM1O96005 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.04■□□□□ 0.16
CLPTM1O96005 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLPTM1O96005 AL009178.2-201ENST00000597278 2719 ntBASIC16.04■□□□□ 0.16
CLPTM1O96005 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CLPTM1O96005 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLPTM1O96005 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLPTM1O96005 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.04■□□□□ 0.16
CLPTM1O96005 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.04■□□□□ 0.16
CLPTM1O96005 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLPTM1O96005 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLPTM1O96005 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLPTM1O96005 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.03■□□□□ 0.16
CLPTM1O96005 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.03■□□□□ 0.16
CLPTM1O96005 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
CLPTM1O96005 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CLPTM1O96005 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.03■□□□□ 0.16
CLPTM1O96005 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
CLPTM1O96005 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.03■□□□□ 0.16
CLPTM1O96005 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CLPTM1O96005 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLPTM1O96005 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.03■□□□□ 0.16
CLPTM1O96005 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 MTHFR-217ENST00000641820 1569 ntBASIC16.03■□□□□ 0.16
CLPTM1O96005 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.03■□□□□ 0.16
CLPTM1O96005 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.03■□□□□ 0.16
CLPTM1O96005 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLPTM1O96005 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLPTM1O96005 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLPTM1O96005 LINC01311-201ENST00000565162 1445 ntBASIC16.02■□□□□ 0.16
CLPTM1O96005 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
CLPTM1O96005 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLPTM1O96005 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.02■□□□□ 0.16
CLPTM1O96005 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLPTM1O96005 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.02■□□□□ 0.16
CLPTM1O96005 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLPTM1O96005 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.02■□□□□ 0.16
CLPTM1O96005 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLPTM1O96005 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLPTM1O96005 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLPTM1O96005 AK4P3-201ENST00000418260 669 ntBASIC16.02■□□□□ 0.16
CLPTM1O96005 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.02■□□□□ 0.16
CLPTM1O96005 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CLPTM1O96005 YBX1P2-201ENST00000489612 999 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms