Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VAPBO95292 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPBO95292 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPBO95292 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.03■□□□□ 0.32
VAPBO95292 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.03■□□□□ 0.32
VAPBO95292 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPBO95292 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.03■□□□□ 0.32
VAPBO95292 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.03■□□□□ 0.32
VAPBO95292 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
VAPBO95292 SAPCD2P3-201ENST00000455031 850 ntBASIC17.03■□□□□ 0.32
VAPBO95292 SCARNA2-201ENST00000458748 420 ntBASIC17.03■□□□□ 0.32
VAPBO95292 AF238378.1-201ENST00000526806 358 ntBASIC17.03■□□□□ 0.32
VAPBO95292 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.03■□□□□ 0.32
VAPBO95292 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPBO95292 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.03■□□□□ 0.32
VAPBO95292 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
VAPBO95292 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.03■□□□□ 0.32
VAPBO95292 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.03■□□□□ 0.32
VAPBO95292 AL391256.1-201ENST00000443260 1855 ntBASIC17.03■□□□□ 0.32
VAPBO95292 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
VAPBO95292 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VAPBO95292 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
VAPBO95292 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
VAPBO95292 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
VAPBO95292 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.02■□□□□ 0.32
VAPBO95292 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.02■□□□□ 0.32
VAPBO95292 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.02■□□□□ 0.32
VAPBO95292 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.02■□□□□ 0.32
VAPBO95292 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.02■□□□□ 0.32
VAPBO95292 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VAPBO95292 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
VAPBO95292 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.02■□□□□ 0.32
VAPBO95292 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VAPBO95292 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VAPBO95292 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VAPBO95292 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VAPBO95292 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VAPBO95292 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.02■□□□□ 0.31
VAPBO95292 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VAPBO95292 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VAPBO95292 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.02■□□□□ 0.31
VAPBO95292 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
VAPBO95292 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VAPBO95292 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.01■□□□□ 0.31
VAPBO95292 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.01■□□□□ 0.31
VAPBO95292 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
VAPBO95292 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VAPBO95292 KRT18P56-201ENST00000507275 550 ntBASIC17.01■□□□□ 0.31
VAPBO95292 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.01■□□□□ 0.31
VAPBO95292 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.01■□□□□ 0.31
VAPBO95292 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.01■□□□□ 0.31
VAPBO95292 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VAPBO95292 IFNL4P1-201ENST00000607083 540 ntBASIC17.01■□□□□ 0.31
VAPBO95292 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.01■□□□□ 0.31
VAPBO95292 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VAPBO95292 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.01■□□□□ 0.31
VAPBO95292 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VAPBO95292 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.01■□□□□ 0.31
VAPBO95292 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VAPBO95292 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms