Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NDUFS3O75489 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NDUFS3O75489 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NDUFS3O75489 AC006504.4-201ENST00000592118 1568 ntBASIC16.89■□□□□ 0.3
NDUFS3O75489 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.89■□□□□ 0.3
NDUFS3O75489 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NDUFS3O75489 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
NDUFS3O75489 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.89■□□□□ 0.3
NDUFS3O75489 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.89■□□□□ 0.29
NDUFS3O75489 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NDUFS3O75489 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NDUFS3O75489 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.89■□□□□ 0.29
NDUFS3O75489 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.89■□□□□ 0.29
NDUFS3O75489 AC004870.1-201ENST00000315132 882 ntBASIC16.89■□□□□ 0.29
NDUFS3O75489 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NDUFS3O75489 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.89■□□□□ 0.29
NDUFS3O75489 ELK2BP-201ENST00000415014 1224 ntBASIC16.89■□□□□ 0.29
NDUFS3O75489 AL450487.1-201ENST00000426799 995 ntBASIC16.89■□□□□ 0.29
NDUFS3O75489 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.89■□□□□ 0.29
NDUFS3O75489 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.89■□□□□ 0.29
NDUFS3O75489 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.89■□□□□ 0.29
NDUFS3O75489 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.89■□□□□ 0.29
NDUFS3O75489 DUX4L17-201ENST00000557360 1267 ntBASIC16.89■□□□□ 0.29
NDUFS3O75489 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.89■□□□□ 0.29
NDUFS3O75489 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.89■□□□□ 0.29
NDUFS3O75489 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NDUFS3O75489 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NDUFS3O75489 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.89■□□□□ 0.29
NDUFS3O75489 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.89■□□□□ 0.29
NDUFS3O75489 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFS3O75489 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.89■□□□□ 0.29
NDUFS3O75489 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NDUFS3O75489 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.89■□□□□ 0.29
NDUFS3O75489 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NDUFS3O75489 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NDUFS3O75489 KRT8P49-201ENST00000604166 1432 ntBASIC16.88■□□□□ 0.29
NDUFS3O75489 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NDUFS3O75489 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NDUFS3O75489 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFS3O75489 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 AF186996.4-201ENST00000467186 377 ntBASIC16.88■□□□□ 0.29
NDUFS3O75489 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFS3O75489 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.88■□□□□ 0.29
NDUFS3O75489 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 RN7SL510P-201ENST00000581311 263 ntBASIC16.88■□□□□ 0.29
NDUFS3O75489 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
NDUFS3O75489 TP73-AS1-207ENST00000624167 988 ntBASIC16.88■□□□□ 0.29
NDUFS3O75489 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.88■□□□□ 0.29
NDUFS3O75489 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.88■□□□□ 0.29
NDUFS3O75489 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.88■□□□□ 0.29
NDUFS3O75489 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFS3O75489 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms