Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CACNA1FO60840 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CACNA1FO60840 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.07■□□□□ 0.96
CACNA1FO60840 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.07■□□□□ 0.96
CACNA1FO60840 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC21.07■□□□□ 0.96
CACNA1FO60840 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CACNA1FO60840 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.07■□□□□ 0.96
CACNA1FO60840 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.06■□□□□ 0.96
CACNA1FO60840 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.06■□□□□ 0.96
CACNA1FO60840 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.06■□□□□ 0.96
CACNA1FO60840 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CACNA1FO60840 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CACNA1FO60840 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CACNA1FO60840 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.06■□□□□ 0.96
CACNA1FO60840 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CACNA1FO60840 AL139400.1-201ENST00000366220 510 ntBASIC21.06■□□□□ 0.96
CACNA1FO60840 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.06■□□□□ 0.96
CACNA1FO60840 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CACNA1FO60840 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.06■□□□□ 0.96
CACNA1FO60840 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CACNA1FO60840 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.06■□□□□ 0.96
CACNA1FO60840 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.06■□□□□ 0.96
CACNA1FO60840 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CACNA1FO60840 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.05■□□□□ 0.96
CACNA1FO60840 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.05■□□□□ 0.96
CACNA1FO60840 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CACNA1FO60840 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CACNA1FO60840 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.05■□□□□ 0.96
CACNA1FO60840 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.05■□□□□ 0.96
CACNA1FO60840 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC21.05■□□□□ 0.96
CACNA1FO60840 AL365330.1-201ENST00000607459 531 ntBASIC21.05■□□□□ 0.96
CACNA1FO60840 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CACNA1FO60840 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.05■□□□□ 0.96
CACNA1FO60840 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CACNA1FO60840 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.05■□□□□ 0.96
CACNA1FO60840 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.05■□□□□ 0.96
CACNA1FO60840 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC21.05■□□□□ 0.96
CACNA1FO60840 LINC01225-203ENST00000563550 1244 ntBASIC21.05■□□□□ 0.96
CACNA1FO60840 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.05■□□□□ 0.96
CACNA1FO60840 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CACNA1FO60840 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CACNA1FO60840 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CACNA1FO60840 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.04■□□□□ 0.96
CACNA1FO60840 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CACNA1FO60840 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 AGGF1P2-201ENST00000426656 2106 ntBASIC21.04■□□□□ 0.96
CACNA1FO60840 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CACNA1FO60840 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.04■□□□□ 0.96
CACNA1FO60840 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.04■□□□□ 0.96
CACNA1FO60840 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.04■□□□□ 0.96
CACNA1FO60840 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.04■□□□□ 0.96
CACNA1FO60840 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.04■□□□□ 0.96
CACNA1FO60840 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.04■□□□□ 0.96
CACNA1FO60840 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.04■□□□□ 0.96
CACNA1FO60840 Z92544.3-201ENST00000624747 417 ntBASIC21.04■□□□□ 0.96
CACNA1FO60840 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CACNA1FO60840 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CACNA1FO60840 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.04■□□□□ 0.96
CACNA1FO60840 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA1FO60840 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.03■□□□□ 0.96
CACNA1FO60840 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA1FO60840 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.03■□□□□ 0.96
CACNA1FO60840 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA1FO60840 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA1FO60840 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CACNA1FO60840 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms