Protein–RNA interactions for Protein: O43246

SLC7A4, Cationic amino acid transporter 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC7A4O43246 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC7A4O43246 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SLC7A4O43246 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC7A4O43246 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC7A4O43246 AC005915.1-201ENST00000624912 2018 ntBASIC17.19■□□□□ 0.34
SLC7A4O43246 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC7A4O43246 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC7A4O43246 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SLC7A4O43246 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC7A4O43246 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.19■□□□□ 0.34
SLC7A4O43246 AC129492.6-201ENST00000611383 1305 ntBASIC17.19■□□□□ 0.34
SLC7A4O43246 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC7A4O43246 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC7A4O43246 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC7A4O43246 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 AC092068.3-201ENST00000587894 2016 ntBASIC17.18■□□□□ 0.34
SLC7A4O43246 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC7A4O43246 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SLC7A4O43246 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC7A4O43246 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC7A4O43246 HTR5BP-201ENST00000430851 1154 ntBASIC17.18■□□□□ 0.34
SLC7A4O43246 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 FAM185BP-201ENST00000443595 716 ntBASIC17.18■□□□□ 0.34
SLC7A4O43246 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
SLC7A4O43246 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC7A4O43246 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC7A4O43246 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC7A4O43246 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC7A4O43246 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC7A4O43246 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC7A4O43246 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
SLC7A4O43246 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC7A4O43246 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC7A4O43246 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
SLC7A4O43246 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC7A4O43246 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC7A4O43246 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.17■□□□□ 0.34
SLC7A4O43246 AC087163.2-201ENST00000457299 853 ntBASIC17.17■□□□□ 0.34
SLC7A4O43246 PKD1P1-201ENST00000458669 6805 ntBASIC17.17■□□□□ 0.34
SLC7A4O43246 AC074386.1-202ENST00000463561 864 ntBASIC17.17■□□□□ 0.34
SLC7A4O43246 ALG1L5P-201ENST00000482043 771 ntBASIC17.17■□□□□ 0.34
SLC7A4O43246 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC7A4O43246 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 MIR4469-201ENST00000583919 79 ntBASIC17.17■□□□□ 0.34
SLC7A4O43246 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC7A4O43246 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC7A4O43246 AC025580.3-201ENST00000617932 1424 ntBASIC17.17■□□□□ 0.34
SLC7A4O43246 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC7A4O43246 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC7A4O43246 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC7A4O43246 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC7A4O43246 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC7A4O43246 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC7A4O43246 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SLC7A4O43246 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC7A4O43246 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC7A4O43246 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC7A4O43246 RPS8P6-201ENST00000426177 609 ntBASIC17.16■□□□□ 0.34
SLC7A4O43246 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC7A4O43246 ACTG1P14-201ENST00000446382 1122 ntBASIC17.16■□□□□ 0.34
SLC7A4O43246 DNAJB3-202ENST00000449667 1266 ntBASIC17.16■□□□□ 0.34
SLC7A4O43246 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC7A4O43246 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC7A4O43246 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC7A4O43246 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC7A4O43246 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC7A4O43246 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC7A4O43246 ELL2P1-201ENST00000413990 1906 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms