Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SDCBPO00560 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 FAM220CP-201ENST00000395253 831 ntBASIC14.46□□□□□ -0.09
SDCBPO00560 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.46□□□□□ -0.09
SDCBPO00560 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.46□□□□□ -0.09
SDCBPO00560 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.46□□□□□ -0.09
SDCBPO00560 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.46□□□□□ -0.09
SDCBPO00560 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.46□□□□□ -0.09
SDCBPO00560 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.46□□□□□ -0.09
SDCBPO00560 AC019129.2-201ENST00000609837 1235 ntBASIC14.46□□□□□ -0.09
SDCBPO00560 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SDCBPO00560 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SDCBPO00560 AC116407.4-201ENST00000623319 1061 ntBASIC14.46□□□□□ -0.09
SDCBPO00560 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.46□□□□□ -0.09
SDCBPO00560 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.46□□□□□ -0.09
SDCBPO00560 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.46□□□□□ -0.09
SDCBPO00560 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SDCBPO00560 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.46□□□□□ -0.09
SDCBPO00560 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDCBPO00560 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SDCBPO00560 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
SDCBPO00560 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.46□□□□□ -0.1
SDCBPO00560 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SDCBPO00560 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
SDCBPO00560 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.46□□□□□ -0.1
SDCBPO00560 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SDCBPO00560 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.46□□□□□ -0.1
SDCBPO00560 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SDCBPO00560 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SDCBPO00560 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.45□□□□□ -0.1
SDCBPO00560 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.45□□□□□ -0.1
SDCBPO00560 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.45□□□□□ -0.1
SDCBPO00560 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SDCBPO00560 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.45□□□□□ -0.1
SDCBPO00560 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SDCBPO00560 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.45□□□□□ -0.1
SDCBPO00560 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 EGFEM1P-202ENST00000431685 1563 ntBASIC14.45□□□□□ -0.1
SDCBPO00560 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.45□□□□□ -0.1
SDCBPO00560 AC009533.2-201ENST00000543664 586 ntBASIC14.45□□□□□ -0.1
SDCBPO00560 AC111152.3-201ENST00000569699 673 ntBASIC14.45□□□□□ -0.1
SDCBPO00560 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.45□□□□□ -0.1
SDCBPO00560 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
SDCBPO00560 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.45□□□□□ -0.1
SDCBPO00560 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SDCBPO00560 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDCBPO00560 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.45□□□□□ -0.1
SDCBPO00560 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.45□□□□□ -0.1
SDCBPO00560 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 AC007950.2-201ENST00000615045 2347 ntBASIC14.44□□□□□ -0.1
SDCBPO00560 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SDCBPO00560 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms