Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.74□□□□□ -0.05
HMX3A6NHT5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMX3A6NHT5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMX3A6NHT5 AC023157.3-201ENST00000619086 2088 ntBASIC14.73□□□□□ -0.05
HMX3A6NHT5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 CA15P1-201ENST00000481698 905 ntBASIC14.73□□□□□ -0.05
HMX3A6NHT5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 AC023908.3-201ENST00000564211 3047 ntBASIC14.73□□□□□ -0.05
HMX3A6NHT5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMX3A6NHT5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.73□□□□□ -0.05
HMX3A6NHT5 AL359258.3-201ENST00000622910 2331 ntBASIC14.72□□□□□ -0.05
HMX3A6NHT5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.72□□□□□ -0.05
HMX3A6NHT5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 AP005242.2-201ENST00000580065 1175 ntBASIC14.72□□□□□ -0.05
HMX3A6NHT5 MIR4674-201ENST00000582457 87 ntBASIC14.72□□□□□ -0.05
HMX3A6NHT5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HMX3A6NHT5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMX3A6NHT5 AL024508.2-201ENST00000607749 1894 ntBASIC14.72□□□□□ -0.05
HMX3A6NHT5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HMX3A6NHT5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.71□□□□□ -0.05
HMX3A6NHT5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.71□□□□□ -0.05
HMX3A6NHT5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HMX3A6NHT5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMX3A6NHT5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HMX3A6NHT5 MIR1238-201ENST00000408483 83 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms