Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AC139887.3-201ENST00000568585 713 ntBASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 AC148477.8-201ENST00000624298 468 ntBASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 NCF1C-201ENST00000438382 1427 ntBASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 AC026691.1-201ENST00000602502 2017 ntBASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEF25A6NGN4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 AC008894.3-201ENST00000624324 3103 ntBASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 RPS2P28-201ENST00000314255 741 ntBASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 AL589182.2-201ENST00000619332 1049 ntBASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 AC107918.4-202ENST00000641623 219 ntBASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 AL391005.1-201ENST00000623953 2435 ntBASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEF25A6NGN4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 AC008741.2-201ENST00000612792 3115 ntBASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 AL031284.1-201ENST00000419297 478 ntBASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 AP001005.1-201ENST00000571755 1248 ntBASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEF25A6NGN4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms