Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 SLC22A20-204ENST00000530038 1673 ntBASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AC092474.2-201ENST00000424288 719 ntBASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 KRT18P32-201ENST00000424695 1287 ntBASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AC009093.7-201ENST00000623853 1223 ntBASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AC067852.2-201ENST00000590513 2313 ntBASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 AC131009.4-201ENST00000624048 1740 ntBASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3FA6NER0 FRMD8P1-201ENST00000440433 1524 ntBASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TBC1D3FA6NER0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TBC1D3FA6NER0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms