Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 LINC00982-205ENST00000420957 435 ntBASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 AC106795.1-205ENST00000512851 1056 ntBASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 AC124947.2-201ENST00000547118 1133 ntBASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 AL139288.1-201ENST00000623748 933 ntBASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
TRGV1A0A0A0MS02 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AC008608.2-201ENST00000606089 416 ntBASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AC073592.4-201ENST00000623827 446 ntBASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AL022326.1-202ENST00000641533 845 ntBASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRGV1A0A0A0MS02 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms