Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.08■□□□□ 0.16
CLCA3PQ9Y6N3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 AC098831.1-202ENST00000438821 336 ntBASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 AL590787.1-201ENST00000568856 1315 ntBASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLCA3PQ9Y6N3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 AL023806.1-201ENST00000603994 1649 ntBASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 PTCHD3P3-201ENST00000403073 906 ntBASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 RPS15P9-201ENST00000494093 319 ntBASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 AC117500.6-201ENST00000624871 588 ntBASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 AL805961.1-202ENST00000641562 540 ntBASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLCA3PQ9Y6N3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 AC116353.5-201ENST00000638148 1699 ntBASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 AP002414.1-201ENST00000391405 1147 ntBASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.05■□□□□ 0.16
CLCA3PQ9Y6N3 RPL13AP23-201ENST00000480739 586 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms