Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 HLA-H-201ENST00000383620 1096 ntBASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 NEFHP1-201ENST00000412845 2629 ntBASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HCFC2Q9Y5Z7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 CU639417.3-201ENST00000624240 1404 ntBASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 SLC25A6P5-201ENST00000435663 894 ntBASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 KRT17P7-201ENST00000451704 1104 ntBASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 MIR4492-201ENST00000581627 80 ntBASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HCFC2Q9Y5Z7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 AL035456.1-201ENST00000456064 1369 ntBASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 AL021920.2-201ENST00000624828 1351 ntBASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 PRYP6-201ENST00000514804 343 ntBASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.54■□□□□ 0.4
HCFC2Q9Y5Z7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 FRMD8P1-201ENST00000440433 1524 ntBASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 AL353705.2-201ENST00000428243 662 ntBASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.53■□□□□ 0.4
HCFC2Q9Y5Z7 AC009407.1-201ENST00000568958 598 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms