Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23■■□□□ 1.27
NINLQ9Y2I6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
NINLQ9Y2I6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC23■■□□□ 1.27
NINLQ9Y2I6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
NINLQ9Y2I6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 SNX33P1-201ENST00000592116 1762 ntBASIC22.99■■□□□ 1.27
NINLQ9Y2I6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 AC142381.1-201ENST00000426099 345 ntBASIC22.99■■□□□ 1.27
NINLQ9Y2I6 AC022494.1-201ENST00000466044 728 ntBASIC22.99■■□□□ 1.27
NINLQ9Y2I6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 IGHV3-62-201ENST00000520057 340 ntBASIC22.99■■□□□ 1.27
NINLQ9Y2I6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 AC051619.7-201ENST00000568314 623 ntBASIC22.99■■□□□ 1.27
NINLQ9Y2I6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.99■■□□□ 1.27
NINLQ9Y2I6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 FAM86GP-201ENST00000448322 971 ntBASIC22.98■■□□□ 1.27
NINLQ9Y2I6 AC105233.2-201ENST00000523697 349 ntBASIC22.98■■□□□ 1.27
NINLQ9Y2I6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 AF228730.5-201ENST00000530288 346 ntBASIC22.98■■□□□ 1.27
NINLQ9Y2I6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 AC004449.1-201ENST00000564240 433 ntBASIC22.98■■□□□ 1.27
NINLQ9Y2I6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NINLQ9Y2I6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC22.97■■□□□ 1.27
NINLQ9Y2I6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 AC027307.2-201ENST00000591252 911 ntBASIC22.97■■□□□ 1.27
NINLQ9Y2I6 AC005498.2-205ENST00000593218 784 ntBASIC22.97■■□□□ 1.27
NINLQ9Y2I6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NINLQ9Y2I6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
NINLQ9Y2I6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms