Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 HTR5BP-201ENST00000430851 1154 ntBASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 AC004877.2-201ENST00000623941 599 ntBASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 BCAR1-209ENST00000546196 1340 ntBASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPA1Q9UND3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 IGLL3P-201ENST00000412472 434 ntBASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 AP006288.1-201ENST00000446065 395 ntBASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 AC010507.1-201ENST00000633895 436 ntBASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NPIPA1Q9UND3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 AC096734.2-201ENST00000562054 433 ntBASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NPIPA1Q9UND3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms