Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 AC006504.4-201ENST00000592118 1568 ntBASIC18.57■□□□□ 0.56
L1RE1Q9UN81 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 ELK2BP-201ENST00000415014 1224 ntBASIC18.57■□□□□ 0.56
L1RE1Q9UN81 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 AL356488.2-201ENST00000602755 427 ntBASIC18.57■□□□□ 0.56
L1RE1Q9UN81 AC117500.6-201ENST00000624871 588 ntBASIC18.57■□□□□ 0.56
L1RE1Q9UN81 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.57■□□□□ 0.56
L1RE1Q9UN81 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 AC006449.5-201ENST00000610658 2098 ntBASIC18.56■□□□□ 0.56
L1RE1Q9UN81 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 LINC00982-205ENST00000420957 435 ntBASIC18.56■□□□□ 0.56
L1RE1Q9UN81 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 AL139424.1-201ENST00000607572 797 ntBASIC18.56■□□□□ 0.56
L1RE1Q9UN81 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 AF228730.7-201ENST00000641842 219 ntBASIC18.56■□□□□ 0.56
L1RE1Q9UN81 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
L1RE1Q9UN81 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 RPL13AP23-201ENST00000480739 586 ntBASIC18.55■□□□□ 0.56
L1RE1Q9UN81 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 AL353135.1-201ENST00000606729 504 ntBASIC18.55■□□□□ 0.56
L1RE1Q9UN81 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
L1RE1Q9UN81 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
L1RE1Q9UN81 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.54■□□□□ 0.56
L1RE1Q9UN81 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
L1RE1Q9UN81 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
L1RE1Q9UN81 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
L1RE1Q9UN81 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
L1RE1Q9UN81 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms