Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 NTF6B-201ENST00000591913 560 ntBASIC16.73■□□□□ 0.27
MKS1Q9NXB0 BNIP3P18-201ENST00000593976 575 ntBASIC16.73■□□□□ 0.27
MKS1Q9NXB0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 AC104640.1-201ENST00000562617 2109 ntBASIC16.73■□□□□ 0.27
MKS1Q9NXB0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 GGT4P-201ENST00000623672 1708 ntBASIC16.73■□□□□ 0.27
MKS1Q9NXB0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
MKS1Q9NXB0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 AC103702.1-201ENST00000548801 2630 ntBASIC16.72■□□□□ 0.27
MKS1Q9NXB0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 AC104076.2-201ENST00000448912 469 ntBASIC16.72■□□□□ 0.27
MKS1Q9NXB0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 AC132872.4-202ENST00000622924 2756 ntBASIC16.72■□□□□ 0.27
MKS1Q9NXB0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 AC233702.3-201ENST00000578656 1387 ntBASIC16.72■□□□□ 0.27
MKS1Q9NXB0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MKS1Q9NXB0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.71■□□□□ 0.27
MKS1Q9NXB0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms