Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTPS2Q9NRF8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.83■□□□□ 0.12
CTPS2Q9NRF8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTPS2Q9NRF8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTPS2Q9NRF8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CTPS2Q9NRF8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.83■□□□□ 0.12
CTPS2Q9NRF8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 AL139384.1-201ENST00000612143 3047 ntBASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 AC003669.1-201ENST00000334569 611 ntBASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 AL732292.2-201ENST00000609649 430 ntBASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 AC012313.10-201ENST00000623509 926 ntBASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 PMPCAP1-201ENST00000508114 1576 ntBASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CTPS2Q9NRF8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 ABCD1P5-201ENST00000445663 754 ntBASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 AC132008.2-207ENST00000454517 770 ntBASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 KRT18P31-201ENST00000506277 1292 ntBASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 KRT18P56-201ENST00000507275 550 ntBASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 AL121772.3-201ENST00000610840 674 ntBASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 AP000867.4-201ENST00000641616 219 ntBASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
CTPS2Q9NRF8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 NFIC-211ENST00000641145 8399 ntBASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS2Q9NRF8 AC148477.5-201ENST00000625164 1645 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms