Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 AC124947.2-201ENST00000547118 1133 ntBASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SND1-IT1Q9HBX3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 MIR718-201ENST00000390190 70 ntBASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 HMGA1P5-201ENST00000412453 271 ntBASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 MYO15B-237ENST00000642007 4893 ntBASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SND1-IT1Q9HBX3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 AC005052.1-201ENST00000625181 2492 ntBASIC11.4□□□□□ -0.59
SND1-IT1Q9HBX3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 AC024909.3-201ENST00000611513 2257 ntBASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SND1-IT1Q9HBX3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms