Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AC090616.6-201ENST00000582640 721 ntBASIC15.02■□□□□ -0
COMMD4Q9H0A8 HYMAI.1-201ENST00000620949 238 ntBASIC15.02■□□□□ -0
COMMD4Q9H0A8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.02■□□□□ -0
COMMD4Q9H0A8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.02■□□□□ -0
COMMD4Q9H0A8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.02□□□□□ -0.01
COMMD4Q9H0A8 HLA-A-202ENST00000376806 1854 ntBASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PCDHB17P-201ENST00000539533 2393 ntBASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 AL645929.1-201ENST00000420084 975 ntBASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 TSPY22P-201ENST00000427496 604 ntBASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 IGHV3-41-201ENST00000613121 348 ntBASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COMMD4Q9H0A8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15□□□□□ -0.01
COMMD4Q9H0A8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15□□□□□ -0.01
COMMD4Q9H0A8 RN7SL606P-201ENST00000472779 293 ntBASIC15□□□□□ -0.01
COMMD4Q9H0A8 VENTXP7-201ENST00000475503 772 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms