Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 AL137784.2-201ENST00000607332 1000 ntBASIC13.77□□□□□ -0.21
NKX6-2Q9C056 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
NKX6-2Q9C056 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 KRASP1-201ENST00000407852 552 ntBASIC13.76□□□□□ -0.21
NKX6-2Q9C056 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 PPT1-215ENST00000641471 2368 ntBASIC13.76□□□□□ -0.21
NKX6-2Q9C056 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.76□□□□□ -0.21
NKX6-2Q9C056 AC106881.1-201ENST00000605849 3329 ntBASIC13.75□□□□□ -0.21
NKX6-2Q9C056 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
NKX6-2Q9C056 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NKX6-2Q9C056 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
NKX6-2Q9C056 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms