Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 AL031008.1-201ENST00000619963 541 ntBASIC15.63■□□□□ 0.09
TRIM2Q9C040 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 FLJ38576-201ENST00000623820 2459 ntBASIC15.63■□□□□ 0.09
TRIM2Q9C040 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 AC124067.4-201ENST00000519691 2379 ntBASIC15.63■□□□□ 0.09
TRIM2Q9C040 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM2Q9C040 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRIM2Q9C040 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 AC078925.2-201ENST00000624013 1973 ntBASIC15.62■□□□□ 0.09
TRIM2Q9C040 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 AL139288.1-201ENST00000623748 933 ntBASIC15.62■□□□□ 0.09
TRIM2Q9C040 AL022326.1-202ENST00000641533 845 ntBASIC15.62■□□□□ 0.09
TRIM2Q9C040 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.62■□□□□ 0.09
TRIM2Q9C040 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRIM2Q9C040 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
TRIM2Q9C040 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 NCF1C-201ENST00000438382 1427 ntBASIC15.61■□□□□ 0.09
TRIM2Q9C040 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 AP002414.1-201ENST00000391405 1147 ntBASIC15.61■□□□□ 0.09
TRIM2Q9C040 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 AC104692.2-201ENST00000603054 253 ntBASIC15.61■□□□□ 0.09
TRIM2Q9C040 AL353135.1-201ENST00000606729 504 ntBASIC15.61■□□□□ 0.09
TRIM2Q9C040 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.61■□□□□ 0.09
TRIM2Q9C040 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRIM2Q9C040 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms