Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 CXCL1P1-201ENST00000502804 216 ntBASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 MTDHP5-201ENST00000598980 586 ntBASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 AC006538.3-201ENST00000612495 578 ntBASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 AC007064.4-201ENST00000637740 555 ntBASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.16□□□□□ -0.14
SSBP3Q9BWW4 AC129492.6-201ENST00000611383 1305 ntBASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 AC010327.4-202ENST00000591484 748 ntBASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SSBP3Q9BWW4 BCAR1-209ENST00000546196 1340 ntBASIC14.15□□□□□ -0.15
SSBP3Q9BWW4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SSBP3Q9BWW4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 UPF3AP3-201ENST00000420996 769 ntBASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 SLC25A6P2-201ENST00000497974 877 ntBASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 AC023141.13-201ENST00000604991 943 ntBASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 AC004877.2-201ENST00000623941 599 ntBASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SSBP3Q9BWW4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms