Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PCGF1Q9BSM1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 PMS2P1-201ENST00000431037 1228 ntBASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AC016396.2-201ENST00000562575 1417 ntBASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AC106730.1-201ENST00000566722 1090 ntBASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 AL356488.2-201ENST00000602755 427 ntBASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PCGF1Q9BSM1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PCGF1Q9BSM1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 RNA5SP415-201ENST00000517246 115 ntBASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 IGHV3-22-201ENST00000520721 359 ntBASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 KRT18P58-201ENST00000527480 1120 ntBASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 AC117500.6-201ENST00000624871 588 ntBASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PCGF1Q9BSM1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PCGF1Q9BSM1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms