Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 AC006538.1-201ENST00000567905 1585 ntBASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 AKR1C7P-201ENST00000305623 895 ntBASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 AP002490.2-201ENST00000524791 560 ntBASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 AL139424.1-201ENST00000607572 797 ntBASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 NCF1C-201ENST00000438382 1427 ntBASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.55■□□□□ 0.4
HERPUD2Q9BSE4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 PAWRP1-201ENST00000451083 565 ntBASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 AL355877.3-201ENST00000622820 899 ntBASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 AL139288.1-201ENST00000623748 933 ntBASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 AC138932.1-201ENST00000534164 6830 ntBASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HERPUD2Q9BSE4 AL021920.2-201ENST00000624828 1351 ntBASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 ME2P1-201ENST00000426028 1970 ntBASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 AL671710.1-201ENST00000610245 2349 ntBASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 RBM17P3-201ENST00000417687 1192 ntBASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 AC013467.2-201ENST00000605472 835 ntBASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 AL139384.1-201ENST00000612143 3047 ntBASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HERPUD2Q9BSE4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms