Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NPAS2Q99743 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 CYP2T1P-202ENST00000641596 2535 ntBASIC16.64■□□□□ 0.25
NPAS2Q99743 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NPAS2Q99743 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.64■□□□□ 0.25
NPAS2Q99743 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.64■□□□□ 0.25
NPAS2Q99743 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
NPAS2Q99743 FAAHP1-202ENST00000446499 1238 ntBASIC16.64■□□□□ 0.25
NPAS2Q99743 KRT16P4-201ENST00000453883 522 ntBASIC16.64■□□□□ 0.25
NPAS2Q99743 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.64■□□□□ 0.25
NPAS2Q99743 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.64■□□□□ 0.25
NPAS2Q99743 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NPAS2Q99743 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
NPAS2Q99743 AC092364.2-201ENST00000596710 2692 ntBASIC16.64■□□□□ 0.25
NPAS2Q99743 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NPAS2Q99743 HYMAI-201ENST00000635591 3347 ntBASIC16.64■□□□□ 0.25
NPAS2Q99743 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NPAS2Q99743 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NPAS2Q99743 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS2Q99743 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS2Q99743 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.63■□□□□ 0.25
NPAS2Q99743 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS2Q99743 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NPAS2Q99743 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS2Q99743 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
NPAS2Q99743 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.63■□□□□ 0.25
NPAS2Q99743 FDX1P1-201ENST00000449115 551 ntBASIC16.63■□□□□ 0.25
NPAS2Q99743 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.63■□□□□ 0.25
NPAS2Q99743 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.63■□□□□ 0.25
NPAS2Q99743 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.63■□□□□ 0.25
NPAS2Q99743 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.63■□□□□ 0.25
NPAS2Q99743 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.63■□□□□ 0.25
NPAS2Q99743 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS2Q99743 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS2Q99743 LINC00554-201ENST00000564841 3011 ntBASIC16.63■□□□□ 0.25
NPAS2Q99743 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NPAS2Q99743 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NPAS2Q99743 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.63■□□□□ 0.25
NPAS2Q99743 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
NPAS2Q99743 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS2Q99743 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS2Q99743 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS2Q99743 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NPAS2Q99743 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS2Q99743 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS2Q99743 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.62■□□□□ 0.25
NPAS2Q99743 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NPAS2Q99743 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.62■□□□□ 0.25
NPAS2Q99743 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 AC007950.2-201ENST00000615045 2347 ntBASIC16.62■□□□□ 0.25
NPAS2Q99743 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS2Q99743 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms