Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
NDNQ99608 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.06■□□□□ 0.32
NDNQ99608 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.06■□□□□ 0.32
NDNQ99608 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
NDNQ99608 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.05■□□□□ 0.32
NDNQ99608 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.05■□□□□ 0.32
NDNQ99608 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 PCDHB17P-201ENST00000539533 2393 ntBASIC17.05■□□□□ 0.32
NDNQ99608 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NDNQ99608 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.05■□□□□ 0.32
NDNQ99608 AC132008.2-207ENST00000454517 770 ntBASIC17.05■□□□□ 0.32
NDNQ99608 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.05■□□□□ 0.32
NDNQ99608 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.05■□□□□ 0.32
NDNQ99608 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NDNQ99608 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NDNQ99608 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
NDNQ99608 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NDNQ99608 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 AC079776.2-201ENST00000641154 1609 ntBASIC17.04■□□□□ 0.32
NDNQ99608 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.04■□□□□ 0.32
NDNQ99608 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.04■□□□□ 0.32
NDNQ99608 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.04■□□□□ 0.32
NDNQ99608 BX005266.1-201ENST00000473402 457 ntBASIC17.04■□□□□ 0.32
NDNQ99608 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.04■□□□□ 0.32
NDNQ99608 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 AC023824.1-201ENST00000562945 2975 ntBASIC17.04■□□□□ 0.32
NDNQ99608 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.04■□□□□ 0.32
NDNQ99608 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NDNQ99608 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NDNQ99608 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NDNQ99608 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.04■□□□□ 0.32
NDNQ99608 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NDNQ99608 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
NDNQ99608 SIGLEC16-201ENST00000599858 1437 ntBASIC17.04■□□□□ 0.32
NDNQ99608 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.04■□□□□ 0.32
NDNQ99608 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NDNQ99608 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDNQ99608 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDNQ99608 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDNQ99608 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.03■□□□□ 0.32
NDNQ99608 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.03■□□□□ 0.32
NDNQ99608 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDNQ99608 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDNQ99608 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NDNQ99608 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDNQ99608 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
NDNQ99608 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NDNQ99608 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.03■□□□□ 0.32
NDNQ99608 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.03■□□□□ 0.32
NDNQ99608 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NDNQ99608 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms