Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV9Q99603 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.24□□□□□ -0.29
TRGV9Q99603 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV9Q99603 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV9Q99603 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV9Q99603 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.24□□□□□ -0.29
TRGV9Q99603 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TRGV9Q99603 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRGV9Q99603 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRGV9Q99603 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
TRGV9Q99603 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV9Q99603 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRGV9Q99603 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRGV9Q99603 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRGV9Q99603 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.24□□□□□ -0.29
TRGV9Q99603 AC011270.2-201ENST00000624293 2550 ntBASIC13.24□□□□□ -0.29
TRGV9Q99603 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
TRGV9Q99603 KRT8P49-201ENST00000604166 1432 ntBASIC13.23□□□□□ -0.29
TRGV9Q99603 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV9Q99603 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TRGV9Q99603 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.23□□□□□ -0.29
TRGV9Q99603 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV9Q99603 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV9Q99603 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.23□□□□□ -0.29
TRGV9Q99603 TMPOP1-202ENST00000424642 1267 ntBASIC13.23□□□□□ -0.29
TRGV9Q99603 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TRGV9Q99603 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.23□□□□□ -0.29
TRGV9Q99603 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV9Q99603 TPSP2-201ENST00000561760 610 ntBASIC13.23□□□□□ -0.29
TRGV9Q99603 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.23□□□□□ -0.29
TRGV9Q99603 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.23□□□□□ -0.29
TRGV9Q99603 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRGV9Q99603 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.23□□□□□ -0.29
TRGV9Q99603 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TRGV9Q99603 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TRGV9Q99603 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TRGV9Q99603 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRGV9Q99603 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.23□□□□□ -0.29
TRGV9Q99603 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRGV9Q99603 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRGV9Q99603 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRGV9Q99603 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TRGV9Q99603 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TRGV9Q99603 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRGV9Q99603 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.22□□□□□ -0.29
TRGV9Q99603 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV9Q99603 LINC00982-205ENST00000420957 435 ntBASIC13.22□□□□□ -0.29
TRGV9Q99603 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV9Q99603 IGHV3-47-201ENST00000425060 335 ntBASIC13.22□□□□□ -0.29
TRGV9Q99603 TOB2P1-201ENST00000469761 992 ntBASIC13.22□□□□□ -0.29
TRGV9Q99603 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.22□□□□□ -0.29
TRGV9Q99603 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.22□□□□□ -0.29
TRGV9Q99603 AC013467.2-201ENST00000605472 835 ntBASIC13.22□□□□□ -0.29
TRGV9Q99603 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms