Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.03□□□□□ -0.16
S1PR3Q99500 KRT18P31-201ENST00000506277 1292 ntBASIC14.03□□□□□ -0.16
S1PR3Q99500 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.03□□□□□ -0.16
S1PR3Q99500 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.03□□□□□ -0.16
S1PR3Q99500 AC012313.10-201ENST00000623509 926 ntBASIC14.03□□□□□ -0.16
S1PR3Q99500 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 SIGLEC16-201ENST00000599858 1437 ntBASIC14.03□□□□□ -0.16
S1PR3Q99500 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.03□□□□□ -0.16
S1PR3Q99500 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 AC092068.3-201ENST00000587894 2016 ntBASIC14.03□□□□□ -0.16
S1PR3Q99500 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.03□□□□□ -0.16
S1PR3Q99500 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
S1PR3Q99500 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.03□□□□□ -0.16
S1PR3Q99500 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
S1PR3Q99500 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
S1PR3Q99500 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
S1PR3Q99500 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
S1PR3Q99500 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
S1PR3Q99500 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
S1PR3Q99500 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.02□□□□□ -0.16
S1PR3Q99500 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.02□□□□□ -0.16
S1PR3Q99500 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
S1PR3Q99500 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
S1PR3Q99500 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
S1PR3Q99500 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.02□□□□□ -0.16
S1PR3Q99500 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
S1PR3Q99500 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.02□□□□□ -0.16
S1PR3Q99500 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.02□□□□□ -0.16
S1PR3Q99500 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
S1PR3Q99500 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.02□□□□□ -0.16
S1PR3Q99500 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
S1PR3Q99500 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
S1PR3Q99500 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.02□□□□□ -0.16
S1PR3Q99500 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.02□□□□□ -0.16
S1PR3Q99500 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
S1PR3Q99500 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.02□□□□□ -0.17
S1PR3Q99500 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.02□□□□□ -0.17
S1PR3Q99500 AP002490.2-201ENST00000524791 560 ntBASIC14.02□□□□□ -0.17
S1PR3Q99500 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.02□□□□□ -0.17
S1PR3Q99500 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.02□□□□□ -0.17
S1PR3Q99500 LINC01711-201ENST00000598340 967 ntBASIC14.02□□□□□ -0.17
S1PR3Q99500 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.02□□□□□ -0.17
S1PR3Q99500 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.02□□□□□ -0.17
S1PR3Q99500 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.02□□□□□ -0.17
S1PR3Q99500 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
S1PR3Q99500 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
S1PR3Q99500 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.02□□□□□ -0.17
S1PR3Q99500 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 AC097637.2-201ENST00000624096 1997 ntBASIC14.02□□□□□ -0.17
S1PR3Q99500 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
S1PR3Q99500 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
S1PR3Q99500 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.01□□□□□ -0.17
S1PR3Q99500 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
S1PR3Q99500 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
S1PR3Q99500 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
S1PR3Q99500 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.01□□□□□ -0.17
S1PR3Q99500 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.01□□□□□ -0.17
S1PR3Q99500 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
S1PR3Q99500 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.01□□□□□ -0.17
S1PR3Q99500 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
S1PR3Q99500 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
S1PR3Q99500 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.01□□□□□ -0.17
S1PR3Q99500 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
S1PR3Q99500 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms