Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 TSPY12P-201ENST00000421279 868 ntBASIC14.36□□□□□ -0.11
CLCC1Q96S66 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 AL671277.2-201ENST00000458060 996 ntBASIC14.36□□□□□ -0.11
CLCC1Q96S66 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 LINC02228-204ENST00000642115 2962 ntBASIC14.36□□□□□ -0.11
CLCC1Q96S66 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCC1Q96S66 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCC1Q96S66 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 AL662844.4-201ENST00000606367 2838 ntBASIC14.35□□□□□ -0.11
CLCC1Q96S66 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCC1Q96S66 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLCC1Q96S66 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms