Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX27Q96L92 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX27Q96L92 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX27Q96L92 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.21■□□□□ 0.51
SNX27Q96L92 RNU1-129P-201ENST00000384064 167 ntBASIC18.21■□□□□ 0.51
SNX27Q96L92 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.21■□□□□ 0.51
SNX27Q96L92 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.21■□□□□ 0.51
SNX27Q96L92 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.21■□□□□ 0.51
SNX27Q96L92 U1.21-201ENST00000580816 167 ntBASIC18.21■□□□□ 0.51
SNX27Q96L92 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 AL009183.1-201ENST00000603760 355 ntBASIC18.21■□□□□ 0.51
SNX27Q96L92 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.21■□□□□ 0.51
SNX27Q96L92 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.21■□□□□ 0.51
SNX27Q96L92 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNX27Q96L92 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX27Q96L92 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.21■□□□□ 0.51
SNX27Q96L92 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SNX27Q96L92 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SNX27Q96L92 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNX27Q96L92 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.21■□□□□ 0.5
SNX27Q96L92 HCG11-201ENST00000411553 5696 ntBASIC18.21■□□□□ 0.5
SNX27Q96L92 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX27Q96L92 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.2■□□□□ 0.5
SNX27Q96L92 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SNX27Q96L92 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX27Q96L92 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNX27Q96L92 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX27Q96L92 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX27Q96L92 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.2■□□□□ 0.5
SNX27Q96L92 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX27Q96L92 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.2■□□□□ 0.5
SNX27Q96L92 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.2■□□□□ 0.5
SNX27Q96L92 AC109635.5-201ENST00000533593 962 ntBASIC18.2■□□□□ 0.5
SNX27Q96L92 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX27Q96L92 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.2■□□□□ 0.5
SNX27Q96L92 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.2■□□□□ 0.5
SNX27Q96L92 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.2■□□□□ 0.5
SNX27Q96L92 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.2■□□□□ 0.5
SNX27Q96L92 CYP2A7P1-201ENST00000595391 815 ntBASIC18.2■□□□□ 0.5
SNX27Q96L92 AL031055.1-201ENST00000606362 631 ntBASIC18.2■□□□□ 0.5
SNX27Q96L92 MIR6799-201ENST00000620297 69 ntBASIC18.2■□□□□ 0.5
SNX27Q96L92 AP001350.2-201ENST00000625104 1094 ntBASIC18.2■□□□□ 0.5
SNX27Q96L92 AL513210.1-201ENST00000629608 234 ntBASIC18.2■□□□□ 0.5
SNX27Q96L92 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX27Q96L92 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
SNX27Q96L92 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX27Q96L92 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SNX27Q96L92 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SNX27Q96L92 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX27Q96L92 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SNX27Q96L92 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SNX27Q96L92 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SNX27Q96L92 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.19■□□□□ 0.5
SNX27Q96L92 CNN2P11-201ENST00000429351 262 ntBASIC18.19■□□□□ 0.5
SNX27Q96L92 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.19■□□□□ 0.5
SNX27Q96L92 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.19■□□□□ 0.5
SNX27Q96L92 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.19■□□□□ 0.5
SNX27Q96L92 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SNX27Q96L92 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.19■□□□□ 0.5
SNX27Q96L92 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.19■□□□□ 0.5
SNX27Q96L92 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX27Q96L92 HTR7P1-202ENST00000624664 4411 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms