Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.96■□□□□ 0.31
SHDQ96IW2 FAM220BP-201ENST00000377689 816 ntBASIC16.96■□□□□ 0.31
SHDQ96IW2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SHDQ96IW2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.96■□□□□ 0.31
SHDQ96IW2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.96■□□□□ 0.31
SHDQ96IW2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.96■□□□□ 0.31
SHDQ96IW2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.96■□□□□ 0.31
SHDQ96IW2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
SHDQ96IW2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SHDQ96IW2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SHDQ96IW2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SHDQ96IW2 AC104794.3-201ENST00000566840 1248 ntBASIC16.96■□□□□ 0.31
SHDQ96IW2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.96■□□□□ 0.31
SHDQ96IW2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 AL844908.2-201ENST00000609461 460 ntBASIC16.96■□□□□ 0.31
SHDQ96IW2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
SHDQ96IW2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.96■□□□□ 0.31
SHDQ96IW2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.96■□□□□ 0.31
SHDQ96IW2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 EGFEM1P-202ENST00000431685 1563 ntBASIC16.96■□□□□ 0.31
SHDQ96IW2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SHDQ96IW2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.96■□□□□ 0.31
SHDQ96IW2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.96■□□□□ 0.31
SHDQ96IW2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SHDQ96IW2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHDQ96IW2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHDQ96IW2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SHDQ96IW2 AC098818.2-201ENST00000564925 2320 ntBASIC16.96■□□□□ 0.3
SHDQ96IW2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHDQ96IW2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.96■□□□□ 0.3
SHDQ96IW2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SHDQ96IW2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
SHDQ96IW2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SHDQ96IW2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.95■□□□□ 0.3
SHDQ96IW2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SHDQ96IW2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 RPL37AP1-201ENST00000412502 279 ntBASIC16.95■□□□□ 0.3
SHDQ96IW2 RPS2P32-201ENST00000439199 892 ntBASIC16.95■□□□□ 0.3
SHDQ96IW2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.95■□□□□ 0.3
SHDQ96IW2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.95■□□□□ 0.3
SHDQ96IW2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 AC106886.1-201ENST00000568660 600 ntBASIC16.95■□□□□ 0.3
SHDQ96IW2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SHDQ96IW2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.95■□□□□ 0.3
SHDQ96IW2 SPTSSB-204ENST00000617024 1292 ntBASIC16.95■□□□□ 0.3
SHDQ96IW2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SHDQ96IW2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SHDQ96IW2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHDQ96IW2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.95■□□□□ 0.3
SHDQ96IW2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.95■□□□□ 0.3
SHDQ96IW2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.95■□□□□ 0.3
SHDQ96IW2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
SHDQ96IW2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.94■□□□□ 0.3
SHDQ96IW2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.94■□□□□ 0.3
SHDQ96IW2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SHDQ96IW2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SHDQ96IW2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SHDQ96IW2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.94■□□□□ 0.3
SHDQ96IW2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHDQ96IW2 DGCR5-201ENST00000399539 862 ntBASIC16.94■□□□□ 0.3
SHDQ96IW2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
SHDQ96IW2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.94■□□□□ 0.3
SHDQ96IW2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms