Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 AL691432.3-201ENST00000621860 400 ntBASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 AC131009.4-201ENST00000624048 1740 ntBASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 RN7SL510P-201ENST00000581311 263 ntBASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 MIR1199-201ENST00000621445 119 ntBASIC16.52■□□□□ 0.24
PDLIM5Q96HC4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.52■□□□□ 0.23
PDLIM5Q96HC4 AL353732.1-201ENST00000569618 1459 ntBASIC16.52■□□□□ 0.23
PDLIM5Q96HC4 AC046158.3-201ENST00000624947 2558 ntBASIC16.52■□□□□ 0.23
PDLIM5Q96HC4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDLIM5Q96HC4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.52■□□□□ 0.23
PDLIM5Q96HC4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDLIM5Q96HC4 KRT8P39-201ENST00000396270 1433 ntBASIC16.52■□□□□ 0.23
PDLIM5Q96HC4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDLIM5Q96HC4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 AC005412.3-201ENST00000580309 715 ntBASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.51■□□□□ 0.23
PDLIM5Q96HC4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 SLC22A20-204ENST00000530038 1673 ntBASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 AC004870.1-201ENST00000315132 882 ntBASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 AL450487.1-201ENST00000426799 995 ntBASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 AC012640.2-201ENST00000561606 901 ntBASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.5■□□□□ 0.23
PDLIM5Q96HC4 AC104692.2-201ENST00000603054 253 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms