Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTP4Q96DX8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 LAGE3P1-201ENST00000425356 484 ntBASIC17.25■□□□□ 0.35
RTP4Q96DX8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 TP73-AS1-207ENST00000624167 988 ntBASIC17.25■□□□□ 0.35
RTP4Q96DX8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTP4Q96DX8 AL391005.1-201ENST00000623953 2435 ntBASIC17.25■□□□□ 0.35
RTP4Q96DX8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RTP4Q96DX8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 AC006504.4-201ENST00000592118 1568 ntBASIC17.24■□□□□ 0.35
RTP4Q96DX8 MTHFR-217ENST00000641820 1569 ntBASIC17.24■□□□□ 0.35
RTP4Q96DX8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 ELK2BP-201ENST00000415014 1224 ntBASIC17.24■□□□□ 0.35
RTP4Q96DX8 KRT18P27-201ENST00000427733 1299 ntBASIC17.24■□□□□ 0.35
RTP4Q96DX8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 AC021087.4-201ENST00000563761 564 ntBASIC17.24■□□□□ 0.35
RTP4Q96DX8 AC091167.2-201ENST00000579581 588 ntBASIC17.24■□□□□ 0.35
RTP4Q96DX8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 AC107918.4-202ENST00000641623 219 ntBASIC17.24■□□□□ 0.35
RTP4Q96DX8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RTP4Q96DX8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTP4Q96DX8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 GGT3P-204ENST00000453783 1664 ntBASIC17.23■□□□□ 0.35
RTP4Q96DX8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms