Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SH3KBP1Q96B97 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 AP002414.1-201ENST00000391405 1147 ntBASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 PRSS29P-201ENST00000440800 595 ntBASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 AC016396.2-201ENST00000562575 1417 ntBASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 AC009053.2-201ENST00000563701 2365 ntBASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SH3KBP1Q96B97 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 PGAM5P1-201ENST00000518923 814 ntBASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SH3KBP1Q96B97 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 MIR4751-201ENST00000578027 74 ntBASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 AL135999.2-201ENST00000622438 1686 ntBASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 TNRC18P3-201ENST00000441896 2691 ntBASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.81■□□□□ 0.28
SH3KBP1Q96B97 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 PKD1P5-201ENST00000532415 10291 ntBASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms