Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPGRQ92834 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.71■□□□□ 0.91
RPGRQ92834 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.71■□□□□ 0.91
RPGRQ92834 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.71■□□□□ 0.91
RPGRQ92834 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.71■□□□□ 0.91
RPGRQ92834 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.71■□□□□ 0.91
RPGRQ92834 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.71■□□□□ 0.91
RPGRQ92834 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.71■□□□□ 0.91
RPGRQ92834 CR383656.12-201ENST00000549567 513 ntBASIC20.71■□□□□ 0.91
RPGRQ92834 MIR4492-201ENST00000581627 80 ntBASIC20.71■□□□□ 0.91
RPGRQ92834 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.71■□□□□ 0.91
RPGRQ92834 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.71■□□□□ 0.91
RPGRQ92834 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RPGRQ92834 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.71■□□□□ 0.91
RPGRQ92834 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RPGRQ92834 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPGRQ92834 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.7■□□□□ 0.91
RPGRQ92834 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRQ92834 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRQ92834 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRQ92834 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.7■□□□□ 0.9
RPGRQ92834 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 RN7SL692P-201ENST00000464677 288 ntBASIC20.7■□□□□ 0.9
RPGRQ92834 HLA-J-202ENST00000469281 1241 ntBASIC20.7■□□□□ 0.9
RPGRQ92834 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 PRYP6-201ENST00000514804 343 ntBASIC20.7■□□□□ 0.9
RPGRQ92834 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.7■□□□□ 0.9
RPGRQ92834 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.7■□□□□ 0.9
RPGRQ92834 AL596325.1-201ENST00000563991 1082 ntBASIC20.7■□□□□ 0.9
RPGRQ92834 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.7■□□□□ 0.9
RPGRQ92834 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.7■□□□□ 0.9
RPGRQ92834 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRQ92834 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRQ92834 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 AC135050.7-201ENST00000624508 2218 ntBASIC20.7■□□□□ 0.9
RPGRQ92834 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRQ92834 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
RPGRQ92834 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPGRQ92834 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RPGRQ92834 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RPGRQ92834 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RPGRQ92834 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.69■□□□□ 0.9
RPGRQ92834 HLA-H-201ENST00000383620 1096 ntBASIC20.69■□□□□ 0.9
RPGRQ92834 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RPGRQ92834 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 HLA-V-204ENST00000476601 1289 ntBASIC20.69■□□□□ 0.9
RPGRQ92834 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.69■□□□□ 0.9
RPGRQ92834 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.69■□□□□ 0.9
RPGRQ92834 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.69■□□□□ 0.9
RPGRQ92834 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.69■□□□□ 0.9
RPGRQ92834 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPGRQ92834 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPGRQ92834 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPGRQ92834 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RPGRQ92834 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.68■□□□□ 0.9
RPGRQ92834 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPGRQ92834 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPGRQ92834 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPGRQ92834 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms