Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.27■□□□□ 0.04
FNDC9Q8TBE3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC9Q8TBE3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.27■□□□□ 0.04
FNDC9Q8TBE3 AC087163.2-201ENST00000457299 853 ntBASIC15.27■□□□□ 0.04
FNDC9Q8TBE3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC9Q8TBE3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FNDC9Q8TBE3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.27■□□□□ 0.04
FNDC9Q8TBE3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.27■□□□□ 0.04
FNDC9Q8TBE3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FNDC9Q8TBE3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 AC116353.5-201ENST00000638148 1699 ntBASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 SLC25A1P3-201ENST00000395415 828 ntBASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 AC010507.1-201ENST00000633895 436 ntBASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 AC080080.1-201ENST00000625121 2420 ntBASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
FNDC9Q8TBE3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 SLC25A6P2-201ENST00000497974 877 ntBASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 AC002347.1-201ENST00000569543 541 ntBASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 AC108860.2-201ENST00000562760 2183 ntBASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FNDC9Q8TBE3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC9Q8TBE3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FNDC9Q8TBE3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.24■□□□□ 0.03
FNDC9Q8TBE3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
FNDC9Q8TBE3 AD000864.1-201ENST00000624076 2295 ntBASIC15.24■□□□□ 0.03
FNDC9Q8TBE3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms