Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 MIR940-201ENST00000401276 94 ntBASIC17.93■□□□□ 0.46
UBA3Q8TBC4 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 IGLL3P-201ENST00000412472 434 ntBASIC17.93■□□□□ 0.46
UBA3Q8TBC4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 KRT18P2-201ENST00000447938 1258 ntBASIC17.93■□□□□ 0.46
UBA3Q8TBC4 HCG4B-203ENST00000450128 991 ntBASIC17.93■□□□□ 0.46
UBA3Q8TBC4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 TUBB8P12-201ENST00000308911 1335 ntBASIC17.93■□□□□ 0.46
UBA3Q8TBC4 TUBB7P-202ENST00000428444 1305 ntBASIC17.93■□□□□ 0.46
UBA3Q8TBC4 TUBB8P7-204ENST00000567960 1332 ntBASIC17.93■□□□□ 0.46
UBA3Q8TBC4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA3Q8TBC4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 TOP3BP1-201ENST00000420768 1380 ntBASIC17.92■□□□□ 0.46
UBA3Q8TBC4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 AC020916.1-201ENST00000587762 1774 ntBASIC17.92■□□□□ 0.46
UBA3Q8TBC4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 AC064836.3-201ENST00000607928 673 ntBASIC17.92■□□□□ 0.46
UBA3Q8TBC4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 AC129492.6-201ENST00000611383 1305 ntBASIC17.92■□□□□ 0.46
UBA3Q8TBC4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 AL645728.1-201ENST00000366221 2101 ntBASIC17.92■□□□□ 0.46
UBA3Q8TBC4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
UBA3Q8TBC4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 AC140113.2-201ENST00000604370 208 ntBASIC17.91■□□□□ 0.46
UBA3Q8TBC4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UBA3Q8TBC4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms