Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 UBB-204ENST00000535788 704 ntTSL 2 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 TLE3-222ENST00000560589 3509 ntTSL 5 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 AC027702.1-201ENST00000563810 1770 ntBASIC10.47□□□□□ -0.73
SVIPQ8NHG7 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SVIPQ8NHG7 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 AL096828.2-201ENST00000567259 1965 ntBASIC10.46□□□□□ -0.73
SVIPQ8NHG7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 SCG3-202ENST00000542355 2163 ntTSL 2 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 OR2I1P-209ENST00000641730 5365 ntBASIC10.46□□□□□ -0.73
SVIPQ8NHG7 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 LINC00954-201ENST00000433669 2472 ntTSL 2 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SVIPQ8NHG7 KCTD1-201ENST00000317932 1715 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 GJB6-201ENST00000241124 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 AC232323.1-201ENST00000540724 2099 ntBASIC10.46□□□□□ -0.74
SVIPQ8NHG7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
SVIPQ8NHG7 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC10.45□□□□□ -0.74
SVIPQ8NHG7 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms