Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 KRT8P48-201ENST00000515599 1220 ntBASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 ACTL9-202ENST00000612068 1252 ntBASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 KRT18P55-202ENST00000578578 1546 ntBASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF248Q8NDW4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 FER1L4-210ENST00000615531 5998 ntBASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 AC125807.1-201ENST00000483097 614 ntBASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF248Q8NDW4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF248Q8NDW4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF248Q8NDW4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
ZNF248Q8NDW4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF248Q8NDW4 AC134043.2-201ENST00000624206 2238 ntBASIC16.21■□□□□ 0.18
ZNF248Q8NDW4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF248Q8NDW4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 AL590787.1-201ENST00000568856 1315 ntBASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 AC002558.1-201ENST00000488906 803 ntBASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 AC079140.1-201ENST00000508039 487 ntBASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 AC027307.3-201ENST00000594262 1100 ntBASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 AC008761.3-201ENST00000624803 892 ntBASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 AL358472.5-202ENST00000641448 1267 ntBASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
ZNF248Q8NDW4 AC129492.6-201ENST00000611383 1305 ntBASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF248Q8NDW4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms